Genomic organization of profilin-III and evidence for a transcript expressed exclusively in testis

Gene. 2002 Jan 23;283(1-2):219-25. doi: 10.1016/s0378-1119(01)00855-1.

Abstract

Profilins are small, widely expressed actin binding proteins, thought to be key regulators of actin dynamics in living cells. So far, three profilin-genes have been described: profilin-I (PFN1), profilin-II (PFN2) with two splice variants and the recently identified profilin-III (PFN3). Here we describe the genomic organization of the genes encoding human and mouse profilin-III. Both are single exon genes and lie in close vicinity to the renal sodium-phosphate transport gene 2 (SLC34A1, NPT2) which is highly expressed in kidney. Northern hybridization to rat tissues has previously demonstrated expression of an approximately 4.5 kb long profilin-III mRNA transcript in kidney and a mRNA transcript of approximately 1 kb in length in testis. Here we show that mouse profilin-III expression is restricted to testis and that the 4.2 kb profilin-III mRNA in kidney is the result of a slc34a1 transcript which includes the antisense profilin-III open reading frame in its 3'-untranslated region. Finally, we demonstrate by in situ hybridization that profilin-III mRNA is localized to cells in the late stage of spermatogenesis.

MeSH terms

  • Amino Acid Sequence
  • Animals
  • Base Sequence
  • Blotting, Northern
  • Contractile Proteins*
  • DNA / chemistry
  • DNA / genetics
  • DNA, Complementary / chemistry
  • DNA, Complementary / genetics
  • Gene Expression
  • Humans
  • In Situ Hybridization
  • Kidney / metabolism
  • Male
  • Mice
  • Mice, Inbred Strains
  • Microfilament Proteins / genetics*
  • Molecular Sequence Data
  • Profilins
  • Protein Isoforms / genetics
  • RNA, Messenger / genetics
  • RNA, Messenger / metabolism
  • Rats
  • Reverse Transcriptase Polymerase Chain Reaction
  • Sequence Alignment
  • Sequence Analysis, DNA
  • Sequence Homology, Amino Acid
  • Testis / metabolism*
  • Transcription, Genetic

Substances

  • Contractile Proteins
  • DNA, Complementary
  • Microfilament Proteins
  • PFN1 protein, human
  • PFN2 protein, human
  • Pfn1 protein, mouse
  • Pfn1 protein, rat
  • Pfn2 protein, mouse
  • Pfn2 protein, rat
  • Pfn3 protein, mouse
  • Profilins
  • Protein Isoforms
  • RNA, Messenger
  • DNA

Associated data

  • GENBANK/AF422809