Tagging ribozyme reaction sites to follow trans-splicing in mammalian cells

Nat Med. 1996 Jun;2(6):643-8. doi: 10.1038/nm0696-643.

Abstract

In mammalian cells, genetic instructions are usually revised by RNA splicing before they are translated to proteins. Here we demonstrate that a trans-splicing group I ribozyme can be employed to intentionally modify the sequence of targeted transcripts in tissue culture cells. By analyzing the ribozyme reaction products, we demonstrate that targeted trans-splicing can proceed in murine fibroblasts with high fidelity, providing direct evidence that ribozymes function as anticipated in a therapeutically relevant setting. Trans-splicing is not very specific however, and the ribozyme reacted with and tagged a variety of cellular transcripts with its 3' exon sequence. RNA tagging provides a unique approach to study RNA catalysis in mammalian cells. Such analysis should facilitate the logical development of safe, therapeutic ribozymes that can repair mutant RNAs associated with a variety of inherited diseases.

Publication types

  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • 3T3 Cells / physiology
  • Animals
  • Base Sequence
  • Cytoplasm / physiology
  • DNA-Directed RNA Polymerases / genetics
  • DNA-Directed RNA Polymerases / metabolism
  • Lac Operon / genetics
  • Mice
  • Models, Genetic
  • Molecular Sequence Data
  • Plasmids / chemistry
  • Plasmids / genetics
  • Polymerase Chain Reaction
  • RNA / genetics
  • RNA / metabolism
  • RNA Splicing*
  • RNA, Bacterial / genetics
  • RNA, Bacterial / metabolism
  • RNA, Catalytic / chemistry*
  • RNA, Catalytic / genetics*
  • RNA, Catalytic / metabolism
  • Substrate Specificity
  • Tetrahymena thermophila / genetics
  • Transcription, Genetic*
  • Transfection
  • Viral Proteins

Substances

  • RNA, Bacterial
  • RNA, Catalytic
  • Viral Proteins
  • RNA
  • bacteriophage T7 RNA polymerase
  • DNA-Directed RNA Polymerases