Backbone cyclic peptide, which mimics the nuclear localization signal of human immunodeficiency virus type 1 matrix protein, inhibits nuclear import and virus production in nondividing cells

Biochemistry. 1998 Apr 21;37(16):5616-22. doi: 10.1021/bi972878h.

Abstract

Here, we describe an application of the backbone cyclic (BC) proteinomimetic approach to the design and the synthesis of a BC peptide which functionally mimics the nuclear localization signal (NLS) region of the human immunodeficiency virus type 1 matrix protein (HIV-1 MA). On the basis of the NMR structure of HIV-1 MA, a library of BC peptides was designed and screened for the ability to inhibit nuclear import of NLS-BSA in digitonin-permeabilized HeLa and Colo-205 cultured cells. The screening yielded a lead compound (IC50 = 3 microM) which was used for the design of a second library. This library led to the discovery of a highly potent BC peptide, designated BCvir, with an IC50 value of 35 nM. This inhibitory potency is compared to a value of 12 microM exhibited by the linear parent HIV-1 MA NLS peptide. BCvir also reduced HIV-1 production by 75% in infected nondividing cultured human T-cells and was relatively resistant to tryptic digestion. These properties make BCvir a potential candidate for the development of a novel class of antiviral drugs which will be based on blocking nuclear import of viral genomes.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Anti-HIV Agents / pharmacology*
  • Biological Transport / drug effects
  • Cell Division / drug effects
  • Drug Stability
  • Gene Products, gag / chemistry*
  • HIV Antigens / chemistry*
  • HIV-1 / drug effects
  • HIV-1 / physiology
  • HeLa Cells
  • Humans
  • Hydrolysis
  • Nuclear Localization Signals / drug effects*
  • Peptide Library
  • Peptides, Cyclic / chemical synthesis
  • Peptides, Cyclic / chemistry*
  • Peptides, Cyclic / pharmacology*
  • Protein Conformation
  • Protein Engineering
  • Trypsin
  • Tumor Cells, Cultured
  • Viral Proteins*
  • Virus Replication / drug effects*
  • gag Gene Products, Human Immunodeficiency Virus

Substances

  • Anti-HIV Agents
  • Gene Products, gag
  • HIV Antigens
  • Nuclear Localization Signals
  • Peptide Library
  • Peptides, Cyclic
  • Viral Proteins
  • gag Gene Products, Human Immunodeficiency Virus
  • p17 protein, Human Immunodeficiency Virus Type 1
  • Trypsin