Chemical genomics: functional analysis of orphan nuclear receptors in the regulation of bile acid metabolism

Med Res Rev. 2001 Nov;21(6):513-22. doi: 10.1002/med.1023.

Abstract

Chemical genomics is the name we have given to the analysis of gene function through use of small molecule chemical tools. Orphan nuclear receptors are ideally suited to this technique of functional analysis, since their activity as transcription factors is regulated by small hydrophobic ligands. GW4064 is a potent and selective nonsteroidal ligand for the nuclear bile acid receptor FXR (NR1H4). Using GW4064 as a chemical tool, we have identified genes regulated by FXR in the liver, including those involved in bile acid synthesis and transport. We have also discovered that PXR (NR1I2) is a lithocholic acid receptor that controls the biosynthesis and metabolism of bile acids. Together FXR and PXR cooperate to control biliary and urinary bile acid excretion. These functions suggest that potent PXR and FXR ligands may offer a new approach to the treatment of cholestatic liver disease.

Publication types

  • Review

MeSH terms

  • Bile Acids and Salts / metabolism*
  • Cholestasis, Intrahepatic / drug therapy
  • DNA-Binding Proteins / agonists
  • DNA-Binding Proteins / genetics
  • DNA-Binding Proteins / physiology*
  • Genome*
  • Humans
  • Pregnane X Receptor
  • Receptors, Cytoplasmic and Nuclear / agonists
  • Receptors, Cytoplasmic and Nuclear / genetics
  • Receptors, Cytoplasmic and Nuclear / physiology*
  • Receptors, Steroid / agonists
  • Receptors, Steroid / genetics
  • Receptors, Steroid / physiology*
  • Transcription Factors / agonists
  • Transcription Factors / genetics
  • Transcription Factors / physiology*

Substances

  • Bile Acids and Salts
  • DNA-Binding Proteins
  • NR1I2 protein, human
  • Pregnane X Receptor
  • Receptors, Cytoplasmic and Nuclear
  • Receptors, Steroid
  • Transcription Factors
  • farnesoid X-activated receptor